Roman Stocker Publications List

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43. Marcos, Fu H. C., Powers T. R., and Stocker R., 2012, “Bacterial rheotaxis”, Proceeding of the National Academy of Sciences of the United States of America, in press.

42. Doostmohammadi A., Stocker R., and Ardekani A., 2012, “Low Reynolds number swimming at pycnoclines”, Proceeding of the National Academy of Sciences of the United States of America, in press.

41. Lewpiriyawong N., Kandaswamy K., Yang C., Ivanov V., and Stocker R., “Microfluidic characterization and continuous separation of cells and particles using conducting PDMS electrode induced AC-dielectrophoresis”, Analytical Chemistry, in press.

40. Stocker R., Aristoff J.M., Jung S., Reis P.M., “Response to Comment on How Cats Lap: Water Uptake by Felis catus”, Science, 334, 311, DOI: 10.1126/science.1203157.

39. Steger D., Berry D., Haider S., Horn M., Wagner M., Stocker R., and Loy A., 2011, “Systematic spatial bias in DNA microarray hybridization is caused by probe spot position-dependent variability in lateral diffusion”, PLoS ONE, 6 , 1-11.

38. Lazova M.D., Ahmed T., Bellomo D., Stocker R., and Shimizu T.S., 2011, “Response rescaling in bacterial chemotaxis”, Proceeding of the National Academy of Sciences of the United States of America, Published online before print August 1, 2011, doi: 10.1073/pnas.1108608108.

37. Durham W.M. and Stocker R., 2012, “Thin phytoplankton layers: Characteristics, mechanisms and consequences”, Annual Review of Marine Sciences, 4, 177-207. 

36. Guasto J.S., Rusconi R. and Stocker R., “Fluid mechanics of planktonic microorganisms”, Annual Review of Fluid Mechanics, 44, 373-400. 

35. Durham W.M., Climent E. and Stocker R., 2011, “Kolmogorov–scale vortices drive patchiness in the distribution of gyrotactic microorganisms”, Physical Review Letters, 106 , 238102.

34. Marcos, Seymour J.R., Luhar M., Durham W.M., Mitchell J.G., Macke A. and Stocker R., 2011, "Microbial alignment in flow changes ocean light climate", Proceeding of the National Academy of Sciences of the United States of America, 108(10), 3860-3864.

33. Stocker R., 2011, "Reverse and flick: Hybrid locomotion in bacteria", Proceeding of the National Academy of Sciences of the United States of America, 108(7), 2635-2636.

32. Reis P.M., Jung W., Aristoff J.M. and Stocker R., 2010, "How cats lap: water uptake by Felis catus", Science, 330, 1231-1234. (all authors equal in status)

31. Aristoff J.M., Stocker R., Reis P.M. and Jung S., 2011, "On the water lapping of felines and the water running of lizards: A unifying physical perspective", Communicative & Integrative Biology, 4(2). 

30. Giuffre C., Hinow P., Vogel R., Ahmed T., Stocker R., Consi T.R., Strickler J.R., 2011, "The ciliate Paramecium shows higher motility in non-uniform chemical landscapes", PLoS ONE, 6(4), e15274.

29. Kindler K., Khalili A. and Stocker R., 2010, "Diffusion–limited retention of porous particles at density interfaces", Proceeding of the National Academy of Sciences of the United States of America, 107, 22163-22168.

28. Ahmed T., Shimizu T.S. and Stocker R., 2010, "Microfluidics for bacterial chemotaxis", Integr. Biol., 2, 604-629.

27. Sutherland K.R., Madin L.P. and Stocker R., 2010, “Filtration of submicrometer particles by pelagic tunicates”, Proceeding of the National Academy of Sciences of the United States of America, 107(34), 15129-15134.

26. Ahmed T., Shimizu T.S. and Stocker R., 2010, “Bacterial chemotaxis in linear and nonlinear steady microfluidic gradients”, Nano Letters, 10, 3379-3385.

25. Ardekani, A.M. and Stocker R., 2010, “Stratlets: low Reynolds number point-force solutions in a stratified fluid”, Phys. Rev. Lett., 105, 084502.

24. Seymour J.R., Simo' R., Ahmed T. and Stocker R., 2010, "Chemoattraction to dimethylsulfoniopropionate throughout the marine microbial food web", Science, 329, 342-345.

23. Seymour J.R., Ahmed T., Durham W.M. and Stocker R., 2010, “Chemotactic response of marine bacteria to the extracellular products of Synechococcus and Prochlorococcus”, Aquat. Microb. Ecol., 59, 161-168.

22. Seymour J.R., Ahmed T. and Stocker, R., 2009, “Bacterial chemotaxis towards the extracellular products of the toxic phytoplankton Heterosigma akashiwo”, Journal of Plankton Research, 31, 1557-1561.

21. Stocker R. and Durham W.M., 2009, “Tumbling for stealth?”, Science, 325, 400-402.

20. Yick K.Y., Torres C., Peacock T., Stocker R., 2009, “Enhanced drag of a sphere settling in a stratified fluid at small Reynolds numbers”, J. Fluid Mech., 632, 49-68.

19. Marcos, Fu H., Powers T. and Stocker R., 2009, “Separation of microscale objects by flow”, Phys. Rev. Lett., 102, 158103.

18. Durham W., Kessler J.O. and Stocker R., 2009, Disruption of motility by shear triggers formation of thin phytoplankton layers, Science, 323, 1067-1070.

17. Stocker R., Seymour J.R., Samadani A., Hunt D.E. and Polz M., 2008, Rapid chemotactic response enables marine bacteria to exploit ephemeral microscale nutrient patches, Proceeding of the National Academy of Sciences of the United States of America, 105, 4209-4214.

16. Seymour J.R., Marcos and Stocker R., 2008, Resource patch formation and exploitation throughout the marine microbial food web, Am. Nat., 173, E15-E29.

15. Ahmed T. and Stocker R., 2008, Experimental verification of the behavioral foundation of bacterial transport parameters using microfluidics, Biophys. J., 95, 4481-4493.

14.  Seymour J.R., Ahmed T., Marcos and Stocker R., 2008, A microfluidic chemotaxis assay to study microbial behaviour in diffusing nutrient patches, Limnol. Oceanogr.: Methods, 6, 477-488.

13. Stocker R. and Bush J.W.M., 2007, Spontaneous oscillations of a sessile lens, J. Fluid Mech., 583, 465-75.

12. Yick K.Y., Stocker R. and Peacock T., 2007, Microscale Synthetic Schlieren, Expts. Fluids, 42, 41-48.

11. Seymour J.R., Marcos and Stocker R., 2007, Chemotactic response of marine microorganisms to microscale nutrient layers, J. Visualized Expts, 4, 052807.

10. Marcos and Stocker R., 2006, Microorganisms in vortices: A microfluidic setup, Limnol. Oceanogr: Methods, 4, 392-398.

9. Stocker R. and Hosoi A.E., 2005, Lubrication in a corner, J. Fluid Mech., 544, 353-377.

8. Heitz R., Peacock T. and Stocker R., 2005, Diffusion-driven flow in a fissure, Phys. Fluids, 17, 128104, 1-3.

7. Stocker R. and Hosoi A.E., 2004, Corner flow in free liquid films, J. Eng. Math., 50, 267-288.

6. Peacock T., Stocker R. and Aristoff J., 2004, An experimental investigation of the angular dependence of diffusion-driven flow, Phys. Fluids, 16, 3503-3505.

5. Wake G.W., Ivey G.N., Imberger J., MacDonald N.R. and Stocker R., 2004, Baroclinic geostrophic adjustment in a rotating circular basin, J. Fluid Mech., 515, 63-86.

4. Stocker R. and Imberger J., 2003, Horizontal transport and dispersion in the surface layer of a medium-sized lake, Limnol Oceanogr., 48, 971-982.

3. Stocker R. and Imberger J., 2003, Energy partitioning and horizontal dispersion in a stratified rotating lake, J. Phys. Oceanogr., 33, 512-529.

2. Laval B., Imberger J., Hodges B.R. and Stocker R., 2003, Modelling circulation in lakes: Spatial and temporal variations, Limnol. Oceanogr., 48, 983-994.

1. Johnson D., Stocker R., Head R., Imberger J. and Pattiaratchi C., 2003, A compact, low-cost GPS drifter for use in the Oceanic nearshore zone, lakes and estuaries, J. Atm. Ocean. Techn., 20, 1880-1884.